pypsa-eur/scripts/build_cutout.py
FabianHofmann b8a7685931
Atlite availability (#224)
* adjust buil_cutout.py and Snakefile

* try adjusting build_renewable_profiles, currently crashing due to weird pyproj error

* build_renewable_profiles: -remove printing gid

* build_renewable_profiles: use dask for paralellization, use dense functions

* build_renewable_profiles:
	- revise imports
	- add logging for long calculation
	- revise explaining comment
	- revise distance calculation

* build profiles: adjust to cutout.grid

* * fix area to square km
* rename potmatrix -> capacity_potential
* rename available to availibility

* config.default update cutout params
build_renewable_potentials: major refactoring and simplification
hydro_profiles: update code

* build profiles: fix weight output dimensions

* build profiles: fix typo, fix selection of buses

* build profiles: reinsert paths variable

* follow up

* build profiles: move to dask calculation only

* CI: set build cutout to true (add CDSAPI)

* build profiles: use pyproj, test with gleas and geokit upstream

* environment.yaml fix atlite version

* build profiles: use dask 'processes' for more than 25 regions

* build profiles: specify dask scheduler according to number of regions

* backpedal a bit, only allow scheduler='processes'

* follow up, code style and fixup

* build profiles: add logger info for underwater fraction calc

* config adjust cutout parameters
Snakefile fixup

* config.default.yaml: adjust resolution

* config: use one cutout in total
build_cutout: automatic detetection of geographical boundaries

* env: add python>=3.8 requirement
build_cutout: fixup for region bound

* config: allow base cutout

* folllow up, fix up

* follow up II

* clean up

* clean up II

* build profiles: move back to multiprocessing due to performance issues

* small code style corrections

* move in pool context

* swqitch to ratsterio

* switch to rasterio for availibility calculation

* tiny fixup

* * build continental raster for offshore distance calculation
* adjust Snakefile to new script build_raster

* rename continental raster to onshore raster
add projected_mask function (not yet tested)
add docstrings, modularize

* Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead
build_natura_raster: adjust code, add function for exporting
build_profiles:
	* add buffer to shore distance to init_globals function
	* update docstrings
	* improve handling of nodata grid codes
	* add geometry mask if natura raster not activated
	(the 255 value is an 'eligible' value for the corine data base,
	do this for excluding data outside the shape)

* build_profiles: adjust docstrings

* update environment

* build profiles: fixup reproject woth padding

* follow up, small fixups

* fix resampling method

checkpoint: reproduces solar profile in tut data

* reintegrate plot map
code style

* config: rename cutout into "base"

* build profiles: adjust to new atlite code

* natura raster: small fixup

* build natura raster: compress tiff file

* config: adjust cutout names

* build profiles: cover case if no or partial overlap between natura raster and cutout

* config-tutorial: adjust cutout params

* buid-profifiles: fixup in gebco filter

* follow up

* update config files

* build profiles: select layoutmatrix != 0

* build profiles: speed up average_distance and underwaterfraction

* build profiles: fix typo

* update release notes
build_cutout: only build needed features

* update envs

* config: add temperature to sarah features

* temporary fix for atlite v0.2.1 and new xarray version release

* env: remove xarray specification

* * remove rule build_country_flh
* build profiles: remove sneaked in line

* doc: update configuration.rst (section atlite) and corresponding csv table

* release notes: fix quotes

* build profiles: use 3035 for area calculation

* Update envs/environment.docs.yaml

* Update scripts/build_cutout.py

* Update doc/release_notes.rst

Co-authored-by: euronion <42553970+euronion@users.noreply.github.com>

* Update doc/configuration.rst

Co-authored-by: euronion <42553970+euronion@users.noreply.github.com>

* Update scripts/build_cutout.py

Co-authored-by: euronion <42553970+euronion@users.noreply.github.com>

* update release notes

* release notes: add deprecation of 'keep_all_available_areas'
build profiles: remove warning for 'keep_all_available_areas'

* build cutout: rearrage code, set buffer correctly

* Rename tutorial cutout to remove name clash with real cutout.

* Update release_notes.rst: Rename tutorial cutout.

* retrieve: update cutouts and downloads (alternative) (#237)

* retrieve: update cutouts and downloads

* retrieve: remove unnecessary import

* use snakemake remote file functionality

* Snakefile: update zenodo link

* update natura remote link (closes #234)

* env: update atlite version to 0.2.2

* env: fix dask version due to memory issues

* test: retrieve cutout instead of build

* test: use tutorial cutout for CI

Co-authored-by: euronion <42553970+euronion@users.noreply.github.com>
Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 17:58:31 +02:00

127 lines
6.2 KiB
Python

"""
Create cutouts with `atlite <https://atlite.readthedocs.io/en/latest/>`_.
For this rule to work you must have
- installed the `Copernicus Climate Data Store <https://cds.climate.copernicus.eu>`_ ``cdsapi`` package (`install with `pip``) and
- registered and setup your CDS API key as described `on their website <https://cds.climate.copernicus.eu/api-how-to>`_.
.. seealso::
For details on the weather data read the `atlite documentation <https://atlite.readthedocs.io/en/latest/>`_.
If you need help specifically for creating cutouts `the corresponding section in the atlite documentation <https://atlite.readthedocs.io/en/latest/examples/create_cutout.html>`_ should be helpful.
Relevant Settings
-----------------
.. code:: yaml
atlite:
nprocesses:
cutouts:
{cutout}:
.. seealso::
Documentation of the configuration file ``config.yaml`` at
:ref:`atlite_cf`
Inputs
------
*None*
Outputs
-------
- ``cutouts/{cutout}``: weather data from either the `ERA5 <https://www.ecmwf.int/en/forecasts/datasets/reanalysis-datasets/era5>`_
reanalysis weather dataset or `SARAH-2 <https://wui.cmsaf.eu/safira/action/viewProduktSearch>`_
satellite-based historic weather data with the following structure:
**ERA5 cutout:**
=================== ========== ========== =========================================================
Field Dimensions Unit Description
=================== ========== ========== =========================================================
pressure time, y, x Pa Surface pressure
------------------- ---------- ---------- ---------------------------------------------------------
temperature time, y, x K Air temperature 2 meters above the surface.
------------------- ---------- ---------- ---------------------------------------------------------
soil temperature time, y, x K Soil temperature between 1 meters and 3 meters
depth (layer 4).
------------------- ---------- ---------- ---------------------------------------------------------
influx_toa time, y, x Wm**-2 Top of Earth's atmosphere TOA incident solar radiation
------------------- ---------- ---------- ---------------------------------------------------------
influx_direct time, y, x Wm**-2 Total sky direct solar radiation at surface
------------------- ---------- ---------- ---------------------------------------------------------
runoff time, y, x m `Runoff <https://en.wikipedia.org/wiki/Surface_runoff>`_
(volume per area)
------------------- ---------- ---------- ---------------------------------------------------------
roughness y, x m Forecast surface roughness
(`roughness length <https://en.wikipedia.org/wiki/Roughness_length>`_)
------------------- ---------- ---------- ---------------------------------------------------------
height y, x m Surface elevation above sea level
------------------- ---------- ---------- ---------------------------------------------------------
albedo time, y, x -- `Albedo <https://en.wikipedia.org/wiki/Albedo>`_
measure of diffuse reflection of solar radiation.
Calculated from relation between surface solar radiation
downwards (Jm**-2) and surface net solar radiation
(Jm**-2). Takes values between 0 and 1.
------------------- ---------- ---------- ---------------------------------------------------------
influx_diffuse time, y, x Wm**-2 Diffuse solar radiation at surface.
Surface solar radiation downwards minus
direct solar radiation.
------------------- ---------- ---------- ---------------------------------------------------------
wnd100m time, y, x ms**-1 Wind speeds at 100 meters (regardless of direction)
=================== ========== ========== =========================================================
.. image:: ../img/era5.png
:scale: 40 %
A **SARAH-2 cutout** can be used to amend the fields ``temperature``, ``influx_toa``, ``influx_direct``, ``albedo``,
``influx_diffuse`` of ERA5 using satellite-based radiation observations.
.. image:: ../img/sarah.png
:scale: 40 %
Description
-----------
"""
import logging
import atlite
import geopandas as gpd
import pandas as pd
from _helpers import configure_logging
logger = logging.getLogger(__name__)
if __name__ == "__main__":
if 'snakemake' not in globals():
from _helpers import mock_snakemake
snakemake = mock_snakemake('build_cutout', cutout='europe-2013-era5')
configure_logging(snakemake)
cutout_params = snakemake.config['atlite']['cutouts'][snakemake.wildcards.cutout]
snapshots = pd.date_range(freq='h', **snakemake.config['snapshots'])
time = [snapshots[0], snapshots[-1]]
cutout_params['time'] = slice(*cutout_params.get('time', time))
if {'x', 'y', 'bounds'}.isdisjoint(cutout_params):
# Determine the bounds from bus regions with a buffer of two grid cells
onshore = gpd.read_file(snakemake.input.regions_onshore)
offshore = gpd.read_file(snakemake.input.regions_offshore)
regions = onshore.append(offshore)
d = max(cutout_params.get('dx', 0.25), cutout_params.get('dy', 0.25))*2
cutout_params['bounds'] = regions.total_bounds + [-d, -d, d, d]
elif {'x', 'y'}.issubset(cutout_params):
cutout_params['x'] = slice(*cutout_params['x'])
cutout_params['y'] = slice(*cutout_params['y'])
logging.info(f"Preparing cutout with parameters {cutout_params}.")
features = cutout_params.pop('features', None)
cutout = atlite.Cutout(snakemake.output[0], **cutout_params)
cutout.prepare(features=features)