pypsa-eur/Snakefile

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# SPDX-FileCopyrightText: : 2017-2020 The PyPSA-Eur Authors
#
# SPDX-License-Identifier: GPL-3.0-or-later
from os.path import normpath, exists
from shutil import copyfile
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
from snakemake.remote.HTTP import RemoteProvider as HTTPRemoteProvider
HTTP = HTTPRemoteProvider()
if not exists("config.yaml"):
copyfile("config.default.yaml", "config.yaml")
configfile: "config.yaml"
COSTS="data/costs.csv"
ATLITE_NPROCESSES = config['atlite'].get('nprocesses', 4)
wildcard_constraints:
simpl="[a-zA-Z0-9]*|all",
clusters="[0-9]+m?|all",
ll="(v|c)([0-9\.]+|opt|all)|all",
opts="[-+a-zA-Z0-9\.]*"
rule cluster_all_networks:
input: expand("networks/elec_s{simpl}_{clusters}.nc", **config['scenario'])
rule extra_components_all_networks:
input: expand("networks/elec_s{simpl}_{clusters}_ec.nc", **config['scenario'])
2020-01-09 13:09:28 +00:00
rule prepare_all_networks:
input: expand("networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc", **config['scenario'])
rule solve_all_networks:
input: expand("results/networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc", **config['scenario'])
if config['enable'].get('prepare_links_p_nom', False):
rule prepare_links_p_nom:
output: 'data/links_p_nom.csv'
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: 'logs/prepare_links_p_nom.log'
threads: 1
resources: mem=500
script: 'scripts/prepare_links_p_nom.py'
2019-11-05 11:53:21 +00:00
datafiles = ['ch_cantons.csv', 'je-e-21.03.02.xls',
'eez/World_EEZ_v8_2014.shp', 'EIA_hydro_generation_2000_2014.csv',
'hydro_capacities.csv', 'naturalearth/ne_10m_admin_0_countries.shp',
'NUTS_2013_60M_SH/data/NUTS_RG_60M_2013.shp', 'nama_10r_3popgdp.tsv.gz',
Update load processing (#211) * build_load_data * Add documentation * updating load data import * Update Config files * Update load.csv * Update add_electricity.py * change log file name * Update scripts/add_electricity.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update build_load_data.py * Update build_load_data.py * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * update gap handling in build_load_data * Update build_load_data.py * Update config.test1.yaml * update test.config * Update config.tutorial.yaml * update load csv function for load data * Update build_load_data.py * Update config.test1.yaml * Update add_electricity.py * Update build_load_data.py * Added error messages if load data contains gaps after modifications * general adjustments: - reduce data source to only entsoe statistics - sanitize code - adjust logging messages - adjust daocstrings * update Snakefile config and docs * update release notes rename build_load -> build_load_data in config * small follow up * - reintroduce choice between powerstatistics and transparency - remove load_ timeseries from databundle - always build load_data - reinsert scaling factor in config - fix url to 2019 version * update doc: configtable, release notes update config.yaml * follow up Co-authored-by: Jan Frederick <jan.frederick.unnewehr@inatech.uni-freiburg.de> Co-authored-by: JanFrederickUnnewehr <50404069+JanFrederickUnnewehr@users.noreply.github.com>
2020-12-03 11:49:04 +00:00
'nama_10r_3gdp.tsv.gz', 'corine/g250_clc06_V18_5.tif']
if not config.get('tutorial', False):
datafiles.extend(["natura/Natura2000_end2015.shp", "GEBCO_2014_2D.nc"])
2019-11-05 11:53:21 +00:00
if config['enable'].get('retrieve_databundle', True):
rule retrieve_databundle:
output: expand('data/bundle/{file}', file=datafiles)
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/retrieve_databundle.log"
script: 'scripts/retrieve_databundle.py'
2019-11-05 11:53:21 +00:00
Update load processing (#211) * build_load_data * Add documentation * updating load data import * Update Config files * Update load.csv * Update add_electricity.py * change log file name * Update scripts/add_electricity.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update build_load_data.py * Update build_load_data.py * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * update gap handling in build_load_data * Update build_load_data.py * Update config.test1.yaml * update test.config * Update config.tutorial.yaml * update load csv function for load data * Update build_load_data.py * Update config.test1.yaml * Update add_electricity.py * Update build_load_data.py * Added error messages if load data contains gaps after modifications * general adjustments: - reduce data source to only entsoe statistics - sanitize code - adjust logging messages - adjust daocstrings * update Snakefile config and docs * update release notes rename build_load -> build_load_data in config * small follow up * - reintroduce choice between powerstatistics and transparency - remove load_ timeseries from databundle - always build load_data - reinsert scaling factor in config - fix url to 2019 version * update doc: configtable, release notes update config.yaml * follow up Co-authored-by: Jan Frederick <jan.frederick.unnewehr@inatech.uni-freiburg.de> Co-authored-by: JanFrederickUnnewehr <50404069+JanFrederickUnnewehr@users.noreply.github.com>
2020-12-03 11:49:04 +00:00
rule build_load_data:
output: "resources/load.csv"
log: "logs/build_load_data.log"
script: 'scripts/build_load_data.py'
2019-10-31 15:45:13 +00:00
rule build_powerplants:
input:
base_network="networks/base.nc",
custom_powerplants="data/custom_powerplants.csv"
2019-10-31 15:45:13 +00:00
output: "resources/powerplants.csv"
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/build_powerplants.log"
2019-10-31 15:45:13 +00:00
threads: 1
resources: mem=500
script: "scripts/build_powerplants.py"
rule base_network:
input:
eg_buses='data/entsoegridkit/buses.csv',
eg_lines='data/entsoegridkit/lines.csv',
eg_links='data/entsoegridkit/links.csv',
eg_converters='data/entsoegridkit/converters.csv',
eg_transformers='data/entsoegridkit/transformers.csv',
parameter_corrections='data/parameter_corrections.yaml',
links_p_nom='data/links_p_nom.csv',
links_tyndp='data/links_tyndp.csv',
country_shapes='resources/country_shapes.geojson',
offshore_shapes='resources/offshore_shapes.geojson',
europe_shape='resources/europe_shape.geojson'
output: "networks/base.nc"
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/base_network.log"
benchmark: "benchmarks/base_network"
threads: 1
resources: mem=500
script: "scripts/base_network.py"
rule build_shapes:
input:
naturalearth='data/bundle/naturalearth/ne_10m_admin_0_countries.shp',
eez='data/bundle/eez/World_EEZ_v8_2014.shp',
nuts3='data/bundle/NUTS_2013_60M_SH/data/NUTS_RG_60M_2013.shp',
nuts3pop='data/bundle/nama_10r_3popgdp.tsv.gz',
nuts3gdp='data/bundle/nama_10r_3gdp.tsv.gz',
ch_cantons='data/bundle/ch_cantons.csv',
ch_popgdp='data/bundle/je-e-21.03.02.xls'
output:
country_shapes='resources/country_shapes.geojson',
offshore_shapes='resources/offshore_shapes.geojson',
europe_shape='resources/europe_shape.geojson',
nuts3_shapes='resources/nuts3_shapes.geojson'
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/build_shapes.log"
threads: 1
resources: mem=500
script: "scripts/build_shapes.py"
rule build_bus_regions:
input:
country_shapes='resources/country_shapes.geojson',
offshore_shapes='resources/offshore_shapes.geojson',
base_network="networks/base.nc"
output:
regions_onshore="resources/regions_onshore.geojson",
regions_offshore="resources/regions_offshore.geojson"
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/build_bus_regions.log"
threads: 1
resources: mem=1000
script: "scripts/build_bus_regions.py"
if config['enable'].get('build_cutout', False):
2019-11-05 11:53:21 +00:00
rule build_cutout:
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
input:
regions_onshore="resources/regions_onshore.geojson",
regions_offshore="resources/regions_offshore.geojson"
output: "cutouts/{cutout}.nc"
Introduce mocksnakemake which acutally parses Snakefile (#107) * rewrite mocksnakemake for parsing real Snakefile * continue add function to scripts * going through all scripts, setting new mocksnakemake * fix plotting scripts * fix build_country_flh * fix build_country_flh II * adjust config files * fix make_summary for tutorial network * create dir also for output * incorporate suggestions * consistent import of mocksnakemake * consistent import of mocksnakemake II * Update scripts/_helpers.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/_helpers.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/_helpers.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/_helpers.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/plot_network.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/plot_network.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/retrieve_databundle.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * use pathlib for mocksnakemake * rename mocksnakemake into mock_snakemake * revert change in data * Update scripts/_helpers.py Co-Authored-By: euronion <42553970+euronion@users.noreply.github.com> * remove setting logfile in mock_snakemake, use Path in configure_logging * fix fallback path and base_dir fix return type of make_io_accessable * reformulate mock_snakemake * incorporate suggestion, fix typos * mock_snakemake: apply absolute paths again, add assertion error *.py: make hard coded io path accessable for mock_snakemake * retrieve_natura_raster: use snakemake.output for fn_out * include suggestion * Apply suggestions from code review Co-Authored-By: Jonas Hörsch <jonas.hoersch@posteo.de> * linting, add return ad end of file * Update scripts/plot_p_nom_max.py Co-Authored-By: Jonas Hörsch <jonas.hoersch@posteo.de> * Update scripts/plot_p_nom_max.py fixes #112 Co-Authored-By: Jonas Hörsch <jonas.hoersch@posteo.de> * plot_p_nom_max: small correction * config.tutorial.yaml fix snapshots end * use techs instead of technology * revert try out from previous commit, complete replacing * change clusters -> clusts in plot_p_nom_max due to wildcard constraints of clusters * change clusters -> clusts in plot_p_nom_max due to wildcard constraints of clusters II
2019-12-09 20:29:15 +00:00
log: "logs/build_cutout/{cutout}.log"
2019-11-05 11:53:21 +00:00
benchmark: "benchmarks/build_cutout_{cutout}"
threads: ATLITE_NPROCESSES
resources: mem=ATLITE_NPROCESSES * 1000
2019-11-05 11:53:21 +00:00
script: "scripts/build_cutout.py"
if config['enable'].get('retrieve_cutout', True):
2019-11-05 11:53:21 +00:00
rule retrieve_cutout:
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
input: HTTP.remote("zenodo.org/record/4709858/files/{cutout}.nc", keep_local=True)
output: "cutouts/{cutout}.nc"
shell: "mv {input} {output}"
2019-11-05 11:53:21 +00:00
2018-08-03 09:54:28 +00:00
if config['enable'].get('build_natura_raster', False):
2019-11-05 11:53:21 +00:00
rule build_natura_raster:
input:
natura="data/bundle/natura/Natura2000_end2015.shp",
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
cutouts=expand("cutouts/{cutouts}.nc", **config['atlite'])
2019-11-05 11:53:21 +00:00
output: "resources/natura.tiff"
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/build_natura_raster.log"
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script: "scripts/build_natura_raster.py"
if config['enable'].get('retrieve_natura_raster', True):
2019-11-05 11:53:21 +00:00
rule retrieve_natura_raster:
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
input: HTTP.remote("zenodo.org/record/4706686/files/natura.tiff", keep_local=True)
2019-11-05 11:53:21 +00:00
output: "resources/natura.tiff"
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
shell: "mv {input} {output}"
rule build_renewable_profiles:
input:
base_network="networks/base.nc",
corine="data/bundle/corine/g250_clc06_V18_5.tif",
natura="resources/natura.tiff",
gebco=lambda w: ("data/bundle/GEBCO_2014_2D.nc"
if "max_depth" in config["renewable"][w.technology].keys()
else []),
country_shapes='resources/country_shapes.geojson',
offshore_shapes='resources/offshore_shapes.geojson',
regions=lambda w: ("resources/regions_onshore.geojson"
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
if w.technology in ('onwind', 'solar')
else "resources/regions_offshore.geojson"),
cutout=lambda w: "cutouts/" + config["renewable"][w.technology]['cutout'] + ".nc"
output: profile="resources/profile_{technology}.nc",
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/build_renewable_profile_{technology}.log"
2018-02-19 09:16:29 +00:00
benchmark: "benchmarks/build_renewable_profiles_{technology}"
threads: ATLITE_NPROCESSES
resources: mem=ATLITE_NPROCESSES * 5000
script: "scripts/build_renewable_profiles.py"
if 'hydro' in config['renewable'].keys():
rule build_hydro_profile:
input:
country_shapes='resources/country_shapes.geojson',
eia_hydro_generation='data/bundle/EIA_hydro_generation_2000_2014.csv',
Atlite availability (#224) * adjust buil_cutout.py and Snakefile * try adjusting build_renewable_profiles, currently crashing due to weird pyproj error * build_renewable_profiles: -remove printing gid * build_renewable_profiles: use dask for paralellization, use dense functions * build_renewable_profiles: - revise imports - add logging for long calculation - revise explaining comment - revise distance calculation * build profiles: adjust to cutout.grid * * fix area to square km * rename potmatrix -> capacity_potential * rename available to availibility * config.default update cutout params build_renewable_potentials: major refactoring and simplification hydro_profiles: update code * build profiles: fix weight output dimensions * build profiles: fix typo, fix selection of buses * build profiles: reinsert paths variable * follow up * build profiles: move to dask calculation only * CI: set build cutout to true (add CDSAPI) * build profiles: use pyproj, test with gleas and geokit upstream * environment.yaml fix atlite version * build profiles: use dask 'processes' for more than 25 regions * build profiles: specify dask scheduler according to number of regions * backpedal a bit, only allow scheduler='processes' * follow up, code style and fixup * build profiles: add logger info for underwater fraction calc * config adjust cutout parameters Snakefile fixup * config.default.yaml: adjust resolution * config: use one cutout in total build_cutout: automatic detetection of geographical boundaries * env: add python>=3.8 requirement build_cutout: fixup for region bound * config: allow base cutout * folllow up, fix up * follow up II * clean up * clean up II * build profiles: move back to multiprocessing due to performance issues * small code style corrections * move in pool context * swqitch to ratsterio * switch to rasterio for availibility calculation * tiny fixup * * build continental raster for offshore distance calculation * adjust Snakefile to new script build_raster * rename continental raster to onshore raster add projected_mask function (not yet tested) add docstrings, modularize * Snakefile: remove build_onhore_raster rule, build mask directly from geometry instead build_natura_raster: adjust code, add function for exporting build_profiles: * add buffer to shore distance to init_globals function * update docstrings * improve handling of nodata grid codes * add geometry mask if natura raster not activated (the 255 value is an 'eligible' value for the corine data base, do this for excluding data outside the shape) * build_profiles: adjust docstrings * update environment * build profiles: fixup reproject woth padding * follow up, small fixups * fix resampling method checkpoint: reproduces solar profile in tut data * reintegrate plot map code style * config: rename cutout into "base" * build profiles: adjust to new atlite code * natura raster: small fixup * build natura raster: compress tiff file * config: adjust cutout names * build profiles: cover case if no or partial overlap between natura raster and cutout * config-tutorial: adjust cutout params * buid-profifiles: fixup in gebco filter * follow up * update config files * build profiles: select layoutmatrix != 0 * build profiles: speed up average_distance and underwaterfraction * build profiles: fix typo * update release notes build_cutout: only build needed features * update envs * config: add temperature to sarah features * temporary fix for atlite v0.2.1 and new xarray version release * env: remove xarray specification * * remove rule build_country_flh * build profiles: remove sneaked in line * doc: update configuration.rst (section atlite) and corresponding csv table * release notes: fix quotes * build profiles: use 3035 for area calculation * Update envs/environment.docs.yaml * Update scripts/build_cutout.py * Update doc/release_notes.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/configuration.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update scripts/build_cutout.py Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * update release notes * release notes: add deprecation of 'keep_all_available_areas' build profiles: remove warning for 'keep_all_available_areas' * build cutout: rearrage code, set buffer correctly * Rename tutorial cutout to remove name clash with real cutout. * Update release_notes.rst: Rename tutorial cutout. * retrieve: update cutouts and downloads (alternative) (#237) * retrieve: update cutouts and downloads * retrieve: remove unnecessary import * use snakemake remote file functionality * Snakefile: update zenodo link * update natura remote link (closes #234) * env: update atlite version to 0.2.2 * env: fix dask version due to memory issues * test: retrieve cutout instead of build * test: use tutorial cutout for CI Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> Co-authored-by: Fabian Neumann <fabian.neumann@outlook.de>
2021-04-27 15:58:31 +00:00
cutout="cutouts/" + config["renewable"]['hydro']['cutout'] + ".nc"
output: 'resources/profile_hydro.nc'
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/build_hydro_profile.log"
resources: mem=5000
script: 'scripts/build_hydro_profile.py'
rule add_electricity:
input:
base_network='networks/base.nc',
tech_costs=COSTS,
regions="resources/regions_onshore.geojson",
powerplants='resources/powerplants.csv',
hydro_capacities='data/bundle/hydro_capacities.csv',
geth_hydro_capacities='data/geth2015_hydro_capacities.csv',
Update load processing (#211) * build_load_data * Add documentation * updating load data import * Update Config files * Update load.csv * Update add_electricity.py * change log file name * Update scripts/add_electricity.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * Update build_load_data.py * Update build_load_data.py * Update scripts/build_load_data.py Co-authored-by: FabianHofmann <hofmann@fias.uni-frankfurt.de> * update gap handling in build_load_data * Update build_load_data.py * Update config.test1.yaml * update test.config * Update config.tutorial.yaml * update load csv function for load data * Update build_load_data.py * Update config.test1.yaml * Update add_electricity.py * Update build_load_data.py * Added error messages if load data contains gaps after modifications * general adjustments: - reduce data source to only entsoe statistics - sanitize code - adjust logging messages - adjust daocstrings * update Snakefile config and docs * update release notes rename build_load -> build_load_data in config * small follow up * - reintroduce choice between powerstatistics and transparency - remove load_ timeseries from databundle - always build load_data - reinsert scaling factor in config - fix url to 2019 version * update doc: configtable, release notes update config.yaml * follow up Co-authored-by: Jan Frederick <jan.frederick.unnewehr@inatech.uni-freiburg.de> Co-authored-by: JanFrederickUnnewehr <50404069+JanFrederickUnnewehr@users.noreply.github.com>
2020-12-03 11:49:04 +00:00
load='resources/load.csv',
nuts3_shapes='resources/nuts3_shapes.geojson',
**{f"profile_{tech}": f"resources/profile_{tech}.nc"
for tech in config['renewable']}
output: "networks/elec.nc"
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_*.py scripts. * Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature.
2019-11-28 07:22:52 +00:00
log: "logs/add_electricity.log"
benchmark: "benchmarks/add_electricity"
threads: 1
resources: mem=3000
script: "scripts/add_electricity.py"
rule simplify_network:
input:
network='networks/elec.nc',
tech_costs=COSTS,
regions_onshore="resources/regions_onshore.geojson",
regions_offshore="resources/regions_offshore.geojson"
output:
network='networks/elec_s{simpl}.nc',
regions_onshore="resources/regions_onshore_elec_s{simpl}.geojson",
regions_offshore="resources/regions_offshore_elec_s{simpl}.geojson",
busmap='resources/busmap_elec_s{simpl}.csv',
connection_costs='resources/connection_costs_s{simpl}.csv'
log: "logs/simplify_network/elec_s{simpl}.log"
benchmark: "benchmarks/simplify_network/elec_s{simpl}"
threads: 1
resources: mem=4000
script: "scripts/simplify_network.py"
rule cluster_network:
input:
network='networks/elec_s{simpl}.nc',
regions_onshore="resources/regions_onshore_elec_s{simpl}.geojson",
regions_offshore="resources/regions_offshore_elec_s{simpl}.geojson",
busmap=ancient('resources/busmap_elec_s{simpl}.csv'),
custom_busmap=("data/custom_busmap_elec_s{simpl}_{clusters}.csv"
2020-12-03 14:17:16 +00:00
if config["enable"].get("custom_busmap", False) else []),
2019-09-23 14:44:48 +00:00
tech_costs=COSTS
output:
network='networks/elec_s{simpl}_{clusters}.nc',
regions_onshore="resources/regions_onshore_elec_s{simpl}_{clusters}.geojson",
regions_offshore="resources/regions_offshore_elec_s{simpl}_{clusters}.geojson",
busmap="resources/busmap_elec_s{simpl}_{clusters}.csv",
linemap="resources/linemap_elec_s{simpl}_{clusters}.csv"
log: "logs/cluster_network/elec_s{simpl}_{clusters}.log"
benchmark: "benchmarks/cluster_network/elec_s{simpl}_{clusters}"
threads: 1
resources: mem=3000
script: "scripts/cluster_network.py"
rule add_extra_components:
input:
network='networks/elec_s{simpl}_{clusters}.nc',
tech_costs=COSTS,
output: 'networks/elec_s{simpl}_{clusters}_ec.nc'
log: "logs/add_extra_components/elec_s{simpl}_{clusters}.log"
benchmark: "benchmarks/add_extra_components/elec_s{simpl}_{clusters}_ec"
threads: 1
resources: mem=3000
script: "scripts/add_extra_components.py"
rule prepare_network:
input: 'networks/elec_s{simpl}_{clusters}_ec.nc', tech_costs=COSTS
output: 'networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc'
log: "logs/prepare_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.log"
benchmark: "benchmarks/prepare_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}"
threads: 1
resources: mem=4000
script: "scripts/prepare_network.py"
def memory(w):
factor = 3.
for o in w.opts.split('-'):
m = re.match(r'^(\d+)h$', o, re.IGNORECASE)
if m is not None:
factor /= int(m.group(1))
break
for o in w.opts.split('-'):
m = re.match(r'^(\d+)seg$', o, re.IGNORECASE)
if m is not None:
factor *= int(m.group(1)) / 8760
break
if w.clusters.endswith('m'):
return int(factor * (18000 + 180 * int(w.clusters[:-1])))
else:
return int(factor * (10000 + 195 * int(w.clusters)))
rule solve_network:
input: "networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc"
output: "results/networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc"
log:
solver=normpath("logs/solve_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_solver.log"),
python="logs/solve_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_python.log",
memory="logs/solve_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_memory.log"
benchmark: "benchmarks/solve_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}"
threads: 4
resources: mem=memory
shadow: "shallow"
script: "scripts/solve_network.py"
rule solve_operations_network:
input:
unprepared="networks/elec_s{simpl}_{clusters}_ec.nc",
optimized="results/networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc"
output: "results/networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_op.nc"
log:
solver=normpath("logs/solve_operations_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_op_solver.log"),
python="logs/solve_operations_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_op_python.log",
memory="logs/solve_operations_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_op_memory.log"
benchmark: "benchmarks/solve_operations_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}"
threads: 4
resources: mem=(lambda w: 5000 + 372 * int(w.clusters))
shadow: "shallow"
script: "scripts/solve_operations_network.py"
rule plot_network:
input:
network="results/networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc",
tech_costs=COSTS
output:
only_map="results/plots/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{attr}.{ext}",
ext="results/plots/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{attr}_ext.{ext}"
log: "logs/plot_network/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{attr}_{ext}.log"
script: "scripts/plot_network.py"
def input_make_summary(w):
# It's mildly hacky to include the separate costs input as first entry
if w.ll.endswith("all"):
ll = config["scenario"]["ll"]
if len(w.ll) == 4:
ll = [l for l in ll if l[0] == w.ll[0]]
else:
ll = w.ll
return ([COSTS] +
expand("results/networks/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}.nc",
ll=ll,
**{k: config["scenario"][k] if getattr(w, k) == "all" else getattr(w, k)
for k in ["simpl", "clusters", "opts"]}))
rule make_summary:
input: input_make_summary
output: directory("results/summaries/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{country}")
log: "logs/make_summary/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{country}.log",
script: "scripts/make_summary.py"
rule plot_summary:
input: "results/summaries/elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{country}"
output: "results/plots/summary_{summary}_elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{country}.{ext}"
log: "logs/plot_summary/{summary}_elec_s{simpl}_{clusters}_ec_l{ll}_{opts}_{country}_{ext}.log"
script: "scripts/plot_summary.py"
def input_plot_p_nom_max(w):
return [("networks/elec_s{simpl}{maybe_cluster}.nc"
.format(maybe_cluster=('' if c == 'full' else ('_' + c)), **w))
for c in w.clusts.split(",")]
rule plot_p_nom_max:
input: input_plot_p_nom_max
output: "results/plots/elec_s{simpl}_cum_p_nom_max_{clusts}_{techs}_{country}.{ext}"
log: "logs/plot_p_nom_max/elec_s{simpl}_{clusts}_{techs}_{country}_{ext}.log"
script: "scripts/plot_p_nom_max.py"