pypsa-eur/environment.docs.yaml
euronion 85c356297a Add logging to logfiles to all snakemake workflow scripts. (#102)
* Add logging to logfiles to all snakemake workflow scripts.

* Fix missing quotation marks in Snakefile.

* Apply suggestions from code review

Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de>

* Apply suggestions from code review

Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de>

* doc: fix _ec_ filenames in docs

* Allow logging message format to be specified in config.yaml.

* Add logging for Snakemake rule 'retrieve_databundle '.

* Add limited logging to STDERR only for retrieve_*.py scripts.

* Import progressbar module only on demand.

* Fix logging to file and enable concurrent printing to STDERR for most scripts.

* Add new 'logging_format' option to Travis CI test config.yaml.

* Add missing parenthesis (bug fix) and cross-os compatible paths.

* Fix typos in messages.

* Use correct log files for logging (bug fix).

* doc: fix line references

* config: logging_format in all configs

* doc: add doc for logging_format

* environment: update to powerplantmatching 0.4.3

* doc: update line references for tutorial.rst

* Change logging configuration scheme for config.yaml.

* Add helper function for doing basic logging configuration.

* Add logpath for prepare_links_p_nom rule.

* Outsource basic logging configuration for all scripts to _helper submodule.

* Update documentation for changed config.yaml structure.

Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used.

* _helpers: Change configure_logging signature.
2019-11-28 08:22:52 +01:00

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YAML

name: pypsa-eur-docs
channels:
- conda-forge
#- bioconda
dependencies:
#- python
- pip
- pypsa>=0.15
- atlite
# Dependencies of the workflow itself
#- xlrd
- scikit-learn
- pycountry
- seaborn
#- snakemake-minimal
- memory_profiler
- yaml
- pytables
- powerplantmatching>=0.4.3
# Second order dependencies which should really be deps of atlite
- xarray
#- netcdf4
#- bottleneck
#- toolz
#- dask
- progressbar2
- pyyaml>=5.1.0
# Include ipython so that one does not inadvertently drop out of the conda
# environment by calling ipython
# - ipython
# GIS dependencies have to come all from conda-forge
- conda-forge::cartopy
- conda-forge::fiona
- conda-forge::pyproj<=1.9.6 # until cartopy release with proj>=6.2
- conda-forge::pyshp
- conda-forge::geopandas
- conda-forge::rasterio
- conda-forge::shapely
- conda-forge::libgdal
# The FRESNA/KIT stuff is not packaged for conda yet
- pip:
- git+https://github.com/FRESNA/vresutils.git#egg=vresutils
- git+https://github.com/PyPSA/glaes.git#egg=glaes
- git+https://github.com/PyPSA/geokit.git#egg=geokit
- cdsapi
- sphinx
- sphinx_rtd_theme