Commit Graph

55 Commits

Author SHA1 Message Date
Fabian Neumann
37a063554d make cutouts protected
https://snakemake.readthedocs.io/en/stable/snakefiles/rules.html\#protected-and-temporary-files
2023-03-08 17:56:50 +01:00
Fabian Neumann
4b3372b53b apply snakefmt to rules/ 2023-03-08 17:46:14 +01:00
Fabian Neumann
2d648dac40 correct paths to scripts in .smk files 2023-03-08 17:45:25 +01:00
Fabian Neumann
8eb37bc263 add conda directive to all rules for use with --use-conda 2023-03-08 17:44:25 +01:00
Fabian Neumann
6bae022d44 modularise Snakefile using rules/*.smk files 2023-03-08 17:29:01 +01:00