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hot fix for snakemake bug

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This commit is contained in:
Philipp Glaum 2021-12-15 11:02:03 +01:00
parent f06c7958bc
commit ed83988ed1
1 changed files with 1 additions and 1 deletions
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2
scripts/_helpers.py
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@ -240,7 +240,7 @@ def mock_snakemake(rulename, **wildcards):
if os.path.exists(p): if os.path.exists(p):
snakefile = p snakefile = p
break break
workflow = sm.Workflow(snakefile) workflow = sm.Workflow(snakefile, overwrite_configfiles=[])
workflow.include(snakefile) workflow.include(snakefile)
workflow.global_resources = {} workflow.global_resources = {}
rule = workflow.get_rule(rulename) rule = workflow.get_rule(rulename)