List first-order dependencies and add pypsa-eur-sec specialties (#257)

* env: list first-order dependencies and add pypsa-eur-sec specialties

* limit numpy version and require atlite 0.2.5

* fix accidental 0 major numpy version

* add future dependency country_converter

envs/environment.yaml

@@ -13,13 +13,12 @@ dependencies:
   - mamba # esp for windows build
 
   - pypsa>=0.17.1 
-  - atlite>=0.2.2
+  - atlite>=0.2.4
   - dask<=2021.3.1 # until https://github.com/dask/dask/issues/7583 is solved
 
   # Dependencies of the workflow itself
   - xlrd
   - openpyxl
-  - scikit-learn
   - pycountry
   - seaborn
   - snakemake-minimal
@@ -28,8 +27,17 @@ dependencies:
   - pytables
   - lxml
   - powerplantmatching>=0.4.8
-  - numpy<=1.19.0 # otherwise macos fails
-
+  - numpy<=1.19 # until new PyPSA after 27-06-21
+  - pandas
+  - geopandas
+  - xarray
+  - netcdf4
+  - networkx
+  - scipy
+  - shapely
+  - progressbar2
+  - pyomo
+  - matplotlib
 
   # Keep in conda environment when calling ipython
   - ipython
@@ -37,6 +45,13 @@ dependencies:
   # GIS dependencies:
   - cartopy
   - descartes
+  - rasterio
+
+  # PyPSA-Eur-Sec Dependencies
+  - geopy
+  - tqdm
+  - pytz
+  - country_converter
 
   - pip:
     - vresutils==0.3.1