Move all rule to main Snakefile

Snakefile

@@ -46,6 +46,12 @@ wildcard_constraints:
     sector_opts="[-+a-zA-Z0-9\.\s]*",
 
 
+rule all:
+    input:
+        RESULTS + "graphs/costs.pdf",
+    default_target: True
+
+
 include: "rules/common.smk"
 include: "rules/collect.smk"
 include: "rules/retrieve.smk"

rules/collect.smk

@@ -14,12 +14,6 @@ localrules:
     plot_networks,
 
 
-rule all:
-    input:
-        RESULTS + "graphs/costs.pdf",
-    default_target: True
-
-
 rule cluster_networks:
     input:
         expand(RESOURCES + "networks/elec_s{simpl}_{clusters}.nc", **config["scenario"]),