Merge branch 'master' into refactor-copy-config-get-rdir

This commit is contained in:
Fabian Hofmann 2024-03-20 09:57:31 +01:00 committed by GitHub
commit 7611b28d16
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2 changed files with 6 additions and 6 deletions

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@ -39,9 +39,9 @@ localrules:
wildcard_constraints:
simpl="[a-zA-Z0-9]*",
clusters="[0-9]+(m|c)?|all",
ll="(v|c)([0-9\.]+|opt)",
opts="[-+a-zA-Z0-9\.]*",
sector_opts="[-+a-zA-Z0-9\.\s]*",
ll=r"(v|c)([0-9\.]+|opt)",
opts=r"[-+a-zA-Z0-9\.]*",
sector_opts=r"[-+a-zA-Z0-9\.\s]*",
include: "rules/common.smk"
@ -110,7 +110,7 @@ rule dag:
conda:
"envs/environment.yaml"
shell:
"""
r"""
snakemake --rulegraph all | sed -n "/digraph/,\$p" > {output.dot}
dot -Tpdf -o {output.pdf} {output.dot}
dot -Tpng -o {output.png} {output.dot}

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@ -31,7 +31,7 @@ rule solve_network:
mem_mb=memory,
runtime=config_provider("solving", "runtime", default="6h"),
shadow:
"minimal"
"shallow"
conda:
"../envs/environment.yaml"
script:
@ -62,7 +62,7 @@ rule solve_operations_network:
mem_mb=(lambda w: 10000 + 372 * int(w.clusters)),
runtime=config_provider("solving", "runtime", default="6h"),
shadow:
"minimal"
"shallow"
conda:
"../envs/environment.yaml"
script: