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make_summary followup on snakemake dependencies removal

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martacki 2022-03-04 16:29:47 +01:00
parent 829c1055f7
commit 3fa8f91e73
1 changed files with 5 additions and 4 deletions
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scripts/make_summary.py
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@ -54,7 +54,7 @@ Replacing '/summaries/' with '/plots/' creates nice colored maps of the results.
"""
import logging
from _helpers import configure_logging, retrieve_snakemake_keys
from _helpers import configure_logging
import os
import pypsa
@ -430,7 +430,8 @@ if __name__ == "__main__":
network_dir = os.path.join('results', 'networks')
configure_logging(snakemake)
paths, config, wildcards, logs, out = retrieve_snakemake_keys(snakemake)
config = snakemake.config
wildcards = snakemake.wildcards
def expand_from_wildcard(key, config):
w = getattr(wildcards, key)
@ -451,6 +452,6 @@ if __name__ == "__main__":
for l in ll
for opts in expand_from_wildcard("opts", config)}
dfs = make_summaries(networks_dict, paths, config, country=wildcards.country)
dfs = make_summaries(networks_dict, snakemake.input, config, country=wildcards.country)
to_csv(dfs, out[0])
to_csv(dfs, snakemake.output[0])