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only use ancient for inputs not outputs

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This commit is contained in:
Fabian Neumann 2024-05-21 14:19:28 +02:00
parent 8b303d93e9
commit 3d5d56acf3
1 changed files with 5 additions and 5 deletions
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10
rules/retrieve.smk
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@ -33,8 +33,8 @@ if config["enable"]["retrieve"] and config["enable"].get("retrieve_databundle",
rule retrieve_databundle: rule retrieve_databundle:
output: output:
ancient(expand("data/bundle/{file}", file=datafiles)), expand("data/bundle/{file}", file=datafiles),
ancient(directory("data/bundle/jrc-idees-2015")), directory("data/bundle/jrc-idees-2015"),
log: log:
"logs/retrieve_databundle.log", "logs/retrieve_databundle.log",
resources: resources:
@ -158,7 +158,7 @@ if config["enable"]["retrieve"]:
keep_local=True, keep_local=True,
), ),
output: output:
ancient("data/shipdensity_global.zip"), "data/shipdensity_global.zip",
log: log:
"logs/retrieve_ship_raster.log", "logs/retrieve_ship_raster.log",
resources: resources:
@ -240,7 +240,7 @@ if config["enable"]["retrieve"]:
zip="data/WDPA_shp.zip", zip="data/WDPA_shp.zip",
folder=directory("data/WDPA"), folder=directory("data/WDPA"),
output: output:
gpkg=ancient("data/WDPA.gpkg"), gpkg="data/WDPA.gpkg",
run: run:
shell("cp {input} {params.zip}") shell("cp {input} {params.zip}")
shell("unzip -o {params.zip} -d {params.folder}") shell("unzip -o {params.zip} -d {params.folder}")
@ -265,7 +265,7 @@ if config["enable"]["retrieve"]:
zip="data/WDPA_WDOECM_marine.zip", zip="data/WDPA_WDOECM_marine.zip",
folder=directory("data/WDPA_WDOECM_marine"), folder=directory("data/WDPA_WDOECM_marine"),
output: output:
gpkg=ancient("data/WDPA_WDOECM_marine.gpkg"), gpkg="data/WDPA_WDOECM_marine.gpkg",
run: run:
shell("cp {input} {params.zip}") shell("cp {input} {params.zip}")
shell("unzip -o {params.zip} -d {params.folder}") shell("unzip -o {params.zip} -d {params.folder}")