Merge pull request #1112 from bobbyxng/master

Fixed mock_snakemake for snakemake v.8.14: All snakemake settings moved
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Fabian Neumann 2024-06-21 12:26:04 +02:00 committed by GitHub
commit 299a8ed65b
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@ -406,13 +406,13 @@ def mock_snakemake(
from snakemake.api import Workflow from snakemake.api import Workflow
from snakemake.common import SNAKEFILE_CHOICES from snakemake.common import SNAKEFILE_CHOICES
from snakemake.script import Snakemake from snakemake.script import Snakemake
from snakemake.settings import ( from snakemake.settings.types import (
ConfigSettings,
DAGSettings, DAGSettings,
ResourceSettings, ResourceSettings,
StorageSettings, StorageSettings,
WorkflowSettings, WorkflowSettings,
) )
from snakemake.settings.types import ConfigSettings
script_dir = Path(__file__).parent.resolve() script_dir = Path(__file__).parent.resolve()
if root_dir is None: if root_dir is None: