pypsa-eur/environment.docs.yaml

# SPDX-FileCopyrightText: : 2017-2020 The PyPSA-Eur Authors
#
# SPDX-License-Identifier: GPL-3.0-or-later

name: pypsa-eur-docs
channels:
  - conda-forge
  #- bioconda
dependencies:
  #- python
  - pip
  - pypsa>=0.17 
  - atlite

  # Dependencies of the workflow itself
  #- xlrd
  - scikit-learn
  - pycountry
  - seaborn
  #- snakemake-minimal
  - memory_profiler
  - yaml
  - pytables
  - powerplantmatching>=0.4.3

  # Second order dependencies which should really be deps of atlite
  - xarray
  #- netcdf4
  #- bottleneck
  #- toolz
  #- dask
  - progressbar2
  - pyyaml>=5.1.0

  # Include ipython so that one does not inadvertently drop out of the conda
  # environment by calling ipython
  # - ipython

  # GIS dependencies have to come all from conda-forge
  - conda-forge::cartopy
  - conda-forge::fiona
  - conda-forge::proj
  - conda-forge::pyshp
  - conda-forge::geopandas
  - conda-forge::rasterio
  - conda-forge::shapely
  - conda-forge::libgdal

  # The FRESNA/KIT stuff is not packaged for conda yet
  - pip:
    - vresutils==0.3.1
    - git+https://github.com/PyPSA/glaes.git#egg=glaes
    - git+https://github.com/PyPSA/geokit.git#egg=geokit
    - cdsapi
    - sphinx
    - sphinx_rtd_theme
add REUSE.software license information (#160) * add REUSE.software license information * add release note on licensing * Update doc/index.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/index.rst Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> * Update doc/release_notes.rst [skip travis] Co-authored-by: euronion <42553970+euronion@users.noreply.github.com> 2020-05-29 07:50:55 +00:00			`# SPDX-FileCopyrightText: : 2017-2020 The PyPSA-Eur Authors`
			`#`
			`# SPDX-License-Identifier: GPL-3.0-or-later`

try more lightweight environment 2019-08-09 09:13:02 +00:00			`name: pypsa-eur-docs`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`channels:`
			`- conda-forge`
try more lightweight environment v2 2019-08-09 09:47:55 +00:00			`#- bioconda`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`dependencies:`
try more lightweight environment v3 2019-08-09 11:31:02 +00:00			`#- python`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`- pip`
environment: PyPSA 0.17 2020-03-23 16:05:59 +00:00			`- pypsa>=0.17`
update conda environment files 2019-10-28 11:02:33 +00:00			`- atlite`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00
			`# Dependencies of the workflow itself`
try more lightweight environment v2 2019-08-09 09:47:55 +00:00			`#- xlrd`
need scikit-learn for clustering rules 2019-08-13 16:08:38 +00:00			`- scikit-learn`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`- pycountry`
			`- seaborn`
try more lightweight environment v2 2019-08-09 09:47:55 +00:00			`#- snakemake-minimal`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`- memory_profiler`
add packages yaml and ppm for docs 2019-10-14 19:19:41 +00:00			`- yaml`
update conda environment files 2019-10-28 11:02:33 +00:00			`- pytables`
Add logging to logfiles to all snakemake workflow scripts. (#102) * Add logging to logfiles to all snakemake workflow scripts. * Fix missing quotation marks in Snakefile. * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Apply suggestions from code review Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * doc: fix _ec_ filenames in docs * Allow logging message format to be specified in config.yaml. * Add logging for Snakemake rule 'retrieve_databundle '. * Add limited logging to STDERR only for retrieve_.py scripts. Import progressbar module only on demand. * Fix logging to file and enable concurrent printing to STDERR for most scripts. * Add new 'logging_format' option to Travis CI test config.yaml. * Add missing parenthesis (bug fix) and cross-os compatible paths. * Fix typos in messages. * Use correct log files for logging (bug fix). * doc: fix line references * config: logging_format in all configs * doc: add doc for logging_format * environment: update to powerplantmatching 0.4.3 * doc: update line references for tutorial.rst * Change logging configuration scheme for config.yaml. * Add helper function for doing basic logging configuration. * Add logpath for prepare_links_p_nom rule. * Outsource basic logging configuration for all scripts to _helper submodule. * Update documentation for changed config.yaml structure. Instead of 'logging_level' and 'logging_format', now 'logging' with subcategories is used. * _helpers: Change configure_logging signature. 2019-11-28 07:22:52 +00:00			`- powerplantmatching>=0.4.3`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00
			`# Second order dependencies which should really be deps of atlite`
			`- xarray`
revert to pyproj<=1.9.6 2019-10-28 14:08:53 +00:00			`#- netcdf4`
try more lightweight environment v2 2019-08-09 09:47:55 +00:00			`#- bottleneck`
			`#- toolz`
			`#- dask`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`- progressbar2`
battery+H2: option for stores and links instead of storage_units (#97) * add_electricity: stores and links instead of storageunits * move code for attaching in add_extra_stores.py * Update Snakefile Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Update Snakefile Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * Update Snakefile Co-Authored-By: Fabian Neumann <fabian.neumann@outlook.de> * rename to add_extra_components.py * incorporate suggestions * Snakefile: update script name * extra_components: import _add_missing_carriers_from_costs * Add '_ec" infix in Snakefile * Snakefile add infix at missing spot * remove unintendetely inserted data.bundle, correct import in add_extra_components * environment: fix pyyaml version * set powerplantmatching as conda-dependency * environment fix minimal ppm version * environment reinsert pyyaml * environment: carry over changes to environment.docs.yaml * extra_components: add carriers * update docstring * Update scripts/add_extra_components.py * Update scripts/add_extra_components.py * tutorial: fix hyperlink [skip travis] * update release notes * update documentation * add_electricity: merge removal of suptech 2019-11-19 18:36:28 +00:00			`- pyyaml>=5.1.0`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00
			`# Include ipython so that one does not inadvertently drop out of the conda`
			`# environment by calling ipython`
try more lightweight environment v2 2019-08-09 09:47:55 +00:00			`# - ipython`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00
			`# GIS dependencies have to come all from conda-forge`
try more lightweight environment v2 2019-08-09 09:47:55 +00:00			`- conda-forge::cartopy`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`- conda-forge::fiona`
environment: Free pyproj from version constraint (fixes #119) (#120) * environment: Free pyproj from version constraint (fixes #119) proj was constrained to 1.9.6, since cartopy was incompatible with recent proj versions. * build_renewable_profiles: Import gdal and geokit after forking GDAL sets up a shared context on module import which seems to contain a handle to the PROJ database for coordinate reference systems. By forking these handles seem to become invalidated or at least are not usable in parallel anymore. Instead importing gdal only after setting up the different processes fixes the database disk image is malformed proj error. 2020-01-23 08:55:59 +00:00			`- conda-forge::proj`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`- conda-forge::pyshp`
			`- conda-forge::geopandas`
			`- conda-forge::rasterio`
			`- conda-forge::shapely`
			`- conda-forge::libgdal`

			`# The FRESNA/KIT stuff is not packaged for conda yet`
			`- pip:`
environment: pin vresutils to 0.3.1 (#137) 2020-03-15 11:52:50 +00:00			`- vresutils==0.3.1`
update environment.yaml 2019-10-03 14:54:22 +00:00			`- git+https://github.com/PyPSA/glaes.git#egg=glaes`
prepare settings for readthedocs deployment 2019-08-08 15:14:02 +00:00			`- git+https://github.com/PyPSA/geokit.git#egg=geokit`
add packages yaml and ppm for docs 2019-10-14 19:19:41 +00:00			`- cdsapi`
try more lightweight environment v2 2019-08-09 09:47:55 +00:00			`- sphinx`
environment_docs vresutils master [skip travis] 2019-11-08 15:51:01 +00:00			`- sphinx_rtd_theme`