# -*- coding: utf-8 -*- # SPDX-FileCopyrightText: : 2017-2023 The PyPSA-Eur Authors # # SPDX-License-Identifier: MIT import contextlib import hashlib import logging import os import re import urllib from pathlib import Path import pandas as pd import pytz import requests import yaml from pypsa.components import component_attrs, components from pypsa.descriptors import Dict from tqdm import tqdm logger = logging.getLogger(__name__) REGION_COLS = ["geometry", "name", "x", "y", "country"] def get_opt(opts, expr, flags=None): """ Return the first option matching the regular expression. The regular expression is case-insensitive by default. """ if flags is None: flags = re.IGNORECASE for o in opts: match = re.match(expr, o, flags=flags) if match: return match.group(0) return None def find_opt(opts, expr): """ Return if available the float after the expression. """ for o in opts: if expr in o: m = re.findall("[0-9]*\.?[0-9]+$", o) if len(m) > 0: return True, float(m[0]) else: return True, None return False, None # Define a context manager to temporarily mute print statements @contextlib.contextmanager def mute_print(): with open(os.devnull, "w") as devnull: with contextlib.redirect_stdout(devnull): yield def configure_logging(snakemake, skip_handlers=False): """ Configure the basic behaviour for the logging module. Note: Must only be called once from the __main__ section of a script. The setup includes printing log messages to STDERR and to a log file defined by either (in priority order): snakemake.log.python, snakemake.log[0] or "logs/{rulename}.log". Additional keywords from logging.basicConfig are accepted via the snakemake configuration file under snakemake.config.logging. Parameters ---------- snakemake : snakemake object Your snakemake object containing a snakemake.config and snakemake.log. skip_handlers : True | False (default) Do (not) skip the default handlers created for redirecting output to STDERR and file. """ import logging kwargs = snakemake.config.get("logging", dict()).copy() kwargs.setdefault("level", "INFO") if skip_handlers is False: fallback_path = Path(__file__).parent.joinpath( "..", "logs", f"{snakemake.rule}.log" ) logfile = snakemake.log.get( "python", snakemake.log[0] if snakemake.log else fallback_path ) kwargs.update( { "handlers": [ # Prefer the 'python' log, otherwise take the first log for each # Snakemake rule logging.FileHandler(logfile), logging.StreamHandler(), ] } ) logging.basicConfig(**kwargs) def update_p_nom_max(n): # if extendable carriers (solar/onwind/...) have capacity >= 0, # e.g. existing assets from the OPSD project are included to the network, # the installed capacity might exceed the expansion limit. # Hence, we update the assumptions. n.generators.p_nom_max = n.generators[["p_nom_min", "p_nom_max"]].max(1) def aggregate_p_nom(n): return pd.concat( [ n.generators.groupby("carrier").p_nom_opt.sum(), n.storage_units.groupby("carrier").p_nom_opt.sum(), n.links.groupby("carrier").p_nom_opt.sum(), n.loads_t.p.groupby(n.loads.carrier, axis=1).sum().mean(), ] ) def aggregate_p(n): return pd.concat( [ n.generators_t.p.sum().groupby(n.generators.carrier).sum(), n.storage_units_t.p.sum().groupby(n.storage_units.carrier).sum(), n.stores_t.p.sum().groupby(n.stores.carrier).sum(), -n.loads_t.p.sum().groupby(n.loads.carrier).sum(), ] ) def aggregate_e_nom(n): return pd.concat( [ (n.storage_units["p_nom_opt"] * n.storage_units["max_hours"]) .groupby(n.storage_units["carrier"]) .sum(), n.stores["e_nom_opt"].groupby(n.stores.carrier).sum(), ] ) def aggregate_p_curtailed(n): return pd.concat( [ ( ( n.generators_t.p_max_pu.sum().multiply(n.generators.p_nom_opt) - n.generators_t.p.sum() ) .groupby(n.generators.carrier) .sum() ), ( (n.storage_units_t.inflow.sum() - n.storage_units_t.p.sum()) .groupby(n.storage_units.carrier) .sum() ), ] ) def aggregate_costs(n, flatten=False, opts=None, existing_only=False): components = dict( Link=("p_nom", "p0"), Generator=("p_nom", "p"), StorageUnit=("p_nom", "p"), Store=("e_nom", "p"), Line=("s_nom", None), Transformer=("s_nom", None), ) costs = {} for c, (p_nom, p_attr) in zip( n.iterate_components(components.keys(), skip_empty=False), components.values() ): if c.df.empty: continue if not existing_only: p_nom += "_opt" costs[(c.list_name, "capital")] = ( (c.df[p_nom] * c.df.capital_cost).groupby(c.df.carrier).sum() ) if p_attr is not None: p = c.pnl[p_attr].sum() if c.name == "StorageUnit": p = p.loc[p > 0] costs[(c.list_name, "marginal")] = ( (p * c.df.marginal_cost).groupby(c.df.carrier).sum() ) costs = pd.concat(costs) if flatten: assert opts is not None conv_techs = opts["conv_techs"] costs = costs.reset_index(level=0, drop=True) costs = costs["capital"].add( costs["marginal"].rename({t: t + " marginal" for t in conv_techs}), fill_value=0.0, ) return costs def progress_retrieve(url, file, disable=False): if disable: urllib.request.urlretrieve(url, file) else: with tqdm(unit="B", unit_scale=True, unit_divisor=1024, miniters=1) as t: def update_to(b=1, bsize=1, tsize=None): if tsize is not None: t.total = tsize t.update(b * bsize - t.n) urllib.request.urlretrieve(url, file, reporthook=update_to) def mock_snakemake(rulename, root_dir=None, configfiles=[], **wildcards): """ This function is expected to be executed from the 'scripts'-directory of ' the snakemake project. It returns a snakemake.script.Snakemake object, based on the Snakefile. If a rule has wildcards, you have to specify them in **wildcards. Parameters ---------- rulename: str name of the rule for which the snakemake object should be generated root_dir: str/path-like path to the root directory of the snakemake project configfiles: list, str list of configfiles to be used to update the config **wildcards: keyword arguments fixing the wildcards. Only necessary if wildcards are needed. """ import os import snakemake as sm from packaging.version import Version, parse from pypsa.descriptors import Dict from snakemake.script import Snakemake script_dir = Path(__file__).parent.resolve() if root_dir is None: root_dir = script_dir.parent else: root_dir = Path(root_dir).resolve() user_in_script_dir = Path.cwd().resolve() == script_dir if user_in_script_dir: os.chdir(root_dir) elif Path.cwd().resolve() != root_dir: raise RuntimeError( "mock_snakemake has to be run from the repository root" f" {root_dir} or scripts directory {script_dir}" ) try: for p in sm.SNAKEFILE_CHOICES: if os.path.exists(p): snakefile = p break kwargs = ( dict(rerun_triggers=[]) if parse(sm.__version__) > Version("7.7.0") else {} ) if isinstance(configfiles, str): configfiles = [configfiles] workflow = sm.Workflow(snakefile, overwrite_configfiles=configfiles, **kwargs) workflow.include(snakefile) if configfiles: for f in configfiles: if not os.path.exists(f): raise FileNotFoundError(f"Config file {f} does not exist.") workflow.configfile(f) workflow.global_resources = {} rule = workflow.get_rule(rulename) dag = sm.dag.DAG(workflow, rules=[rule]) wc = Dict(wildcards) job = sm.jobs.Job(rule, dag, wc) def make_accessable(*ios): for io in ios: for i in range(len(io)): io[i] = os.path.abspath(io[i]) make_accessable(job.input, job.output, job.log) snakemake = Snakemake( job.input, job.output, job.params, job.wildcards, job.threads, job.resources, job.log, job.dag.workflow.config, job.rule.name, None, ) # create log and output dir if not existent for path in list(snakemake.log) + list(snakemake.output): Path(path).parent.mkdir(parents=True, exist_ok=True) finally: if user_in_script_dir: os.chdir(script_dir) return snakemake def generate_periodic_profiles(dt_index, nodes, weekly_profile, localize=None): """ Give a 24*7 long list of weekly hourly profiles, generate this for each country for the period dt_index, taking account of time zones and summer time. """ weekly_profile = pd.Series(weekly_profile, range(24 * 7)) week_df = pd.DataFrame(index=dt_index, columns=nodes) for node in nodes: timezone = pytz.timezone(pytz.country_timezones[node[:2]][0]) tz_dt_index = dt_index.tz_convert(timezone) week_df[node] = [24 * dt.weekday() + dt.hour for dt in tz_dt_index] week_df[node] = week_df[node].map(weekly_profile) week_df = week_df.tz_localize(localize) return week_df def parse(l): return yaml.safe_load(l[0]) if len(l) == 1 else {l.pop(0): parse(l)} def update_config_with_sector_opts(config, sector_opts): from snakemake.utils import update_config for o in sector_opts.split("-"): if o.startswith("CF+"): l = o.split("+")[1:] update_config(config, parse(l)) def get_checksum_from_zenodo(file_url): parts = file_url.split("/") record_id = parts[parts.index("record") + 1] filename = parts[-1] response = requests.get(f"https://zenodo.org/api/records/{record_id}", timeout=30) response.raise_for_status() data = response.json() for file in data["files"]: if file["key"] == filename: return file["checksum"] return None def validate_checksum(file_path, zenodo_url=None, checksum=None): """ Validate file checksum against provided or Zenodo-retrieved checksum. Calculates the hash of a file using 64KB chunks. Compares it against a given checksum or one from a Zenodo URL. Parameters ---------- file_path : str Path to the file for checksum validation. zenodo_url : str, optional URL of the file on Zenodo to fetch the checksum. checksum : str, optional Checksum (format 'hash_type:checksum_value') for validation. Raises ------ AssertionError If the checksum does not match, or if neither `checksum` nor `zenodo_url` is provided. Examples -------- >>> validate_checksum("/path/to/file", checksum="md5:abc123...") >>> validate_checksum( ... "/path/to/file", ... zenodo_url="https://zenodo.org/record/12345/files/example.txt", ... ) If the checksum is invalid, an AssertionError will be raised. """ assert checksum or zenodo_url, "Either checksum or zenodo_url must be provided" if zenodo_url: checksum = get_checksum_from_zenodo(zenodo_url) hash_type, checksum = checksum.split(":") hasher = hashlib.new(hash_type) with open(file_path, "rb") as f: for chunk in iter(lambda: f.read(65536), b""): # 64kb chunks hasher.update(chunk) calculated_checksum = hasher.hexdigest() assert ( calculated_checksum == checksum ), "Checksum is invalid. This may be due to an incomplete download. Delete the file and re-execute the rule."