From f89d61ff077441897a8d0ef735fc82233ba35794 Mon Sep 17 00:00:00 2001 From: Fabian Date: Wed, 26 Jul 2023 11:41:24 +0200 Subject: [PATCH] snakefile: fix path in sync rule --- Snakefile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Snakefile b/Snakefile index 5edf2c6a..0e783beb 100644 --- a/Snakefile +++ b/Snakefile @@ -107,6 +107,6 @@ rule sync: shell: """ rsync -uvarh --ignore-missing-args --files-from=.sync-send . {params.cluster} - rsync -uvarh --no-g {params.cluster}/results results || echo "No results directory, skipping rsync" - rsync -uvarh --no-g {params.cluster}/logs logs || echo "No logs directory, skipping rsync" + rsync -uvarh --no-g {params.cluster}/results . || echo "No results directory, skipping rsync" + rsync -uvarh --no-g {params.cluster}/logs . || echo "No logs directory, skipping rsync" """