From e228ce7e46357121fd79a67e068f35352f0c2870 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Jonas=20H=C3=B6rsch?= <hoersch@fias.uni-frankfurt.de>
Date: Fri, 9 Mar 2018 15:40:51 +0100
Subject: [PATCH] cluster: Configure time limit in cluster.yaml

---
 cluster.yaml      | 4 ++--
 snakemake_cluster | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/cluster.yaml b/cluster.yaml
index 218421d4..2e2f5ae9 100644
--- a/cluster.yaml
+++ b/cluster.yaml
@@ -3,7 +3,7 @@ __default__:
   name: "pypsa-eur.{rule}.{wildcards}"
   output: "logs/cluster/{rule}.{wildcards}.out"
   error: "logs/cluster/{rule}.{wildcards}.err"
+  time: "0-1"
 solve_network:
   partition: "{params.partition}"
-  output: "logs/cluster/{rule}.{wildcards}.out"
-  error: "logs/cluster/{rule}.{wildcards}.err"
+  time: "8-0"
diff --git a/snakemake_cluster b/snakemake_cluster
index 5900bb50..a84473be 100755
--- a/snakemake_cluster
+++ b/snakemake_cluster
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-snakemake --latency-wait 100 --cluster-config cluster.yaml --cluster "sbatch --parsable -J '{cluster.name}' -p {cluster.partition} -n 1 -t '6-0' --cpus-per-task {threads} -o '{cluster.output}' --mem {resources.mem_mb}" "$@"
+snakemake --latency-wait 100 --cluster-config cluster.yaml --cluster "sbatch --parsable -J '{cluster.name}' -p {cluster.partition} -n 1 -t {cluster.time} --cpus-per-task {threads} -o '{cluster.output}' --mem {resources.mem_mb}" "$@"