From 6763dbaacc5943ebad24b2f472976bd8747244ad Mon Sep 17 00:00:00 2001 From: Fabian Neumann Date: Wed, 8 Mar 2023 18:45:11 +0100 Subject: [PATCH] add message for dag rule --- Snakefile | 23 ++++++++++++----------- 1 file changed, 12 insertions(+), 11 deletions(-) diff --git a/Snakefile b/Snakefile index 3be6afb9..f8a56585 100644 --- a/Snakefile +++ b/Snakefile @@ -69,14 +69,15 @@ rule purge: rule dag: - output: - dot=RESOURCES + "dag.dot", - pdf=RESOURCES + "dag.pdf", - png=RESOURCES + "dag.png" - conda: "envs/environment.yaml" - shell: - """ - snakemake --rulegraph all | sed -n "/digraph/,\$p" > {output.dot} - dot -Tpdf -o {output.pdf} {output.dot} - dot -Tpng -o {output.png} {output.dot} - """ \ No newline at end of file + message: "Creating DAG of workflow." + output: + dot=RESOURCES + "dag.dot", + pdf=RESOURCES + "dag.pdf", + png=RESOURCES + "dag.png" + conda: "envs/environment.yaml" + shell: + """ + snakemake --rulegraph all | sed -n "/digraph/,\$p" > {output.dot} + dot -Tpdf -o {output.pdf} {output.dot} + dot -Tpng -o {output.png} {output.dot} + """ \ No newline at end of file